Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 AC104982.3-201ENST00000581995 514 ntBASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 AC138028.6-201ENST00000616106 1482 ntBASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 AL139094.1-201ENST00000405549 1188 ntBASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 AKR7A2P1-201ENST00000460134 915 ntBASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 SCARNA20.5-201ENST00000516991 142 ntBASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 AL096828.3-201ENST00000615354 462 ntBASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNGAP1Q96PV0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 MIR663B-201ENST00000408361 115 ntBASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 ENPP7P14-201ENST00000621765 1040 ntBASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNGAP1Q96PV0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 LRRC59-203ENST00000576448 1531 ntBASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms