Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
DDX11Q96FC9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX11Q96FC9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX11Q96FC9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 AC074338.1-201ENST00000416825 156 ntBASIC18.33■□□□□ 0.52
DDX11Q96FC9 AC112492.5-201ENST00000421897 457 ntBASIC18.33■□□□□ 0.52
DDX11Q96FC9 ACA64.2-201ENST00000459014 129 ntBASIC18.33■□□□□ 0.52
DDX11Q96FC9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX11Q96FC9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX11Q96FC9 TCAF2P1-201ENST00000291129 2421 ntBASIC18.33■□□□□ 0.52
DDX11Q96FC9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX11Q96FC9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX11Q96FC9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX11Q96FC9 CLK3P2-201ENST00000427566 1453 ntBASIC18.33■□□□□ 0.52
DDX11Q96FC9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
DDX11Q96FC9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 RARRES2P5-201ENST00000564013 466 ntBASIC18.32■□□□□ 0.52
DDX11Q96FC9 AC106886.1-201ENST00000568660 600 ntBASIC18.32■□□□□ 0.52
DDX11Q96FC9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DDX11Q96FC9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX11Q96FC9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 KRT8P44-201ENST00000441609 1350 ntBASIC18.31■□□□□ 0.52
DDX11Q96FC9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 TMEM261P1-201ENST00000604899 340 ntBASIC18.31■□□□□ 0.52
DDX11Q96FC9 WFDC1-204ENST00000613603 549 ntBASIC18.31■□□□□ 0.52
DDX11Q96FC9 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
DDX11Q96FC9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX11Q96FC9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms