Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 AC079776.1-201ENST00000401540 1152 ntBASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 GHSR-202ENST00000427970 912 ntBASIC15.25■□□□□ 0.03
SCAMP4Q969E2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 CROCCP4-201ENST00000457096 498 ntBASIC15.25■□□□□ 0.03
SCAMP4Q969E2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 AC106760.1-201ENST00000508690 800 ntBASIC15.25■□□□□ 0.03
SCAMP4Q969E2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 HILS1-202ENST00000545329 423 ntBASIC15.25■□□□□ 0.03
SCAMP4Q969E2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.25■□□□□ 0.03
SCAMP4Q969E2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 AC091951.1-201ENST00000512854 2465 ntBASIC15.24■□□□□ 0.03
SCAMP4Q969E2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 AL157414.3-201ENST00000624276 1954 ntBASIC15.24■□□□□ 0.03
SCAMP4Q969E2 AC126365.1-201ENST00000578585 1514 ntBASIC15.24■□□□□ 0.03
SCAMP4Q969E2 REXO1L4P-201ENST00000605109 1937 ntBASIC15.24■□□□□ 0.03
SCAMP4Q969E2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 KLF2P2-201ENST00000416807 1039 ntBASIC15.24■□□□□ 0.03
SCAMP4Q969E2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 AL109954.1-202ENST00000564051 2148 ntBASIC15.24■□□□□ 0.03
SCAMP4Q969E2 AC106886.1-201ENST00000568660 600 ntBASIC15.24■□□□□ 0.03
SCAMP4Q969E2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 REXO1L5P-201ENST00000622260 2098 ntBASIC15.24■□□□□ 0.03
SCAMP4Q969E2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCAMP4Q969E2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms