Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.28■□□□□ 0.2
ATP2A3Q93084 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AC136604.1-201ENST00000418535 575 ntBASIC16.28■□□□□ 0.2
ATP2A3Q93084 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 USP32P1-208ENST00000506594 1164 ntBASIC16.28■□□□□ 0.2
ATP2A3Q93084 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AC233724.13-201ENST00000598383 410 ntBASIC16.28■□□□□ 0.2
ATP2A3Q93084 COX11-210ENST00000639671 696 ntBASIC16.28■□□□□ 0.2
ATP2A3Q93084 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2A3Q93084 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.27■□□□□ 0.2
ATP2A3Q93084 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 SOCS2P1-201ENST00000417727 557 ntBASIC16.27■□□□□ 0.2
ATP2A3Q93084 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 KRT223P-202ENST00000449164 1292 ntBASIC16.27■□□□□ 0.2
ATP2A3Q93084 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 ENPP7P5-201ENST00000541031 1031 ntBASIC16.27■□□□□ 0.2
ATP2A3Q93084 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.27■□□□□ 0.2
ATP2A3Q93084 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATP2A3Q93084 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2A3Q93084 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2A3Q93084 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.27■□□□□ 0.19
ATP2A3Q93084 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ATP2A3Q93084 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2A3Q93084 AC006058.4-201ENST00000624016 1670 ntBASIC16.27■□□□□ 0.19
ATP2A3Q93084 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2A3Q93084 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.27■□□□□ 0.19
ATP2A3Q93084 SBF1P1-201ENST00000444527 5631 ntBASIC16.27■□□□□ 0.19
ATP2A3Q93084 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 AC018665.1-201ENST00000622927 1362 ntBASIC16.26■□□□□ 0.19
ATP2A3Q93084 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms