Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.3■□□□□ 0.36
USP6NLQ92738 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
USP6NLQ92738 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.3■□□□□ 0.36
USP6NLQ92738 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.3■□□□□ 0.36
USP6NLQ92738 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
USP6NLQ92738 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.3■□□□□ 0.36
USP6NLQ92738 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 Z97180.1-201ENST00000445173 988 ntBASIC17.3■□□□□ 0.36
USP6NLQ92738 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 NUP210P1-202ENST00000504322 710 ntBASIC17.3■□□□□ 0.36
USP6NLQ92738 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.3■□□□□ 0.36
USP6NLQ92738 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.3■□□□□ 0.36
USP6NLQ92738 PRKXP1-201ENST00000561423 1122 ntBASIC17.3■□□□□ 0.36
USP6NLQ92738 DUX4L47-201ENST00000566374 394 ntBASIC17.3■□□□□ 0.36
USP6NLQ92738 MIR4783-201ENST00000580343 82 ntBASIC17.3■□□□□ 0.36
USP6NLQ92738 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.3■□□□□ 0.36
USP6NLQ92738 AC004466.1-201ENST00000599515 1080 ntBASIC17.3■□□□□ 0.36
USP6NLQ92738 AC018635.2-201ENST00000608625 364 ntBASIC17.3■□□□□ 0.36
USP6NLQ92738 AC091544.8-201ENST00000619490 361 ntBASIC17.3■□□□□ 0.36
USP6NLQ92738 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.3■□□□□ 0.36
USP6NLQ92738 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
USP6NLQ92738 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.3■□□□□ 0.36
USP6NLQ92738 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
USP6NLQ92738 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.3■□□□□ 0.36
USP6NLQ92738 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP6NLQ92738 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.3■□□□□ 0.36
USP6NLQ92738 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.29■□□□□ 0.36
USP6NLQ92738 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
USP6NLQ92738 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
USP6NLQ92738 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.29■□□□□ 0.36
USP6NLQ92738 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.29■□□□□ 0.36
USP6NLQ92738 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.29■□□□□ 0.36
USP6NLQ92738 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 AL161670.2-201ENST00000557650 1227 ntBASIC17.29■□□□□ 0.36
USP6NLQ92738 AC013355.1-201ENST00000562625 723 ntBASIC17.29■□□□□ 0.36
USP6NLQ92738 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
USP6NLQ92738 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.29■□□□□ 0.36
USP6NLQ92738 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
USP6NLQ92738 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP6NLQ92738 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.28■□□□□ 0.36
USP6NLQ92738 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP6NLQ92738 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP6NLQ92738 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP6NLQ92738 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
USP6NLQ92738 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP6NLQ92738 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP6NLQ92738 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.28■□□□□ 0.36
USP6NLQ92738 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP6NLQ92738 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.28■□□□□ 0.36
USP6NLQ92738 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.28■□□□□ 0.36
USP6NLQ92738 EEF1DP6-201ENST00000449232 372 ntBASIC17.28■□□□□ 0.36
USP6NLQ92738 RNMTL1P1-201ENST00000454103 560 ntBASIC17.28■□□□□ 0.36
USP6NLQ92738 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP6NLQ92738 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.28■□□□□ 0.36
USP6NLQ92738 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.28■□□□□ 0.36
USP6NLQ92738 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
USP6NLQ92738 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms