Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AC025048.3-201ENST00000590609 569 ntBASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AC011467.4-201ENST00000594891 528 ntBASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AC005702.4-201ENST00000618393 416 ntBASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AL033527.5-202ENST00000641632 1098 ntBASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 AC018529.2-202ENST00000611482 3087 ntBASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf54Q8WWF1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 CETN4P-206ENST00000642099 2168 ntBASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 RPL37AP1-201ENST00000412502 279 ntBASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 MIR3687-2-201ENST00000577708 61 ntBASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 LINC01115-203ENST00000606068 577 ntBASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 MIR3687-1-201ENST00000614492 61 ntBASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 AP001059.3-201ENST00000619053 235 ntBASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 OR2I1P-209ENST00000641730 5365 ntBASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.03■□□□□ 0.16
C1orf54Q8WWF1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms