Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 AP002414.3-201ENST00000589352 1468 ntBASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 AP000550.4-202ENST00000639755 178 ntBASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM4Q8WVI0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 AC130686.1-201ENST00000622936 2466 ntBASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 AL139010.1-201ENST00000454878 894 ntBASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 SAPCD2P3-201ENST00000455031 850 ntBASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 CLEC4GP1-201ENST00000596555 870 ntBASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 AL121772.3-201ENST00000610840 674 ntBASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 AL356585.2-201ENST00000625078 2396 ntBASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM4Q8WVI0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms