Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TNRC18P2-201ENST00000417666 2714 ntBASIC15.7■□□□□ 0.1
PTCD2Q8WV60 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 TOMM22P5-201ENST00000416399 439 ntBASIC15.7■□□□□ 0.1
PTCD2Q8WV60 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 SRPK2P-201ENST00000523408 1100 ntBASIC15.7■□□□□ 0.1
PTCD2Q8WV60 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 WASH3P-207ENST00000560956 1394 ntBASIC15.7■□□□□ 0.1
PTCD2Q8WV60 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AC067930.6-201ENST00000623257 4947 ntBASIC15.69■□□□□ 0.1
PTCD2Q8WV60 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 GHSR-202ENST00000427970 912 ntBASIC15.69■□□□□ 0.1
PTCD2Q8WV60 KRT18P64-201ENST00000434946 1219 ntBASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 WASH4P-201ENST00000564273 1246 ntBASIC15.69■□□□□ 0.1
PTCD2Q8WV60 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AC025048.6-201ENST00000634326 1161 ntBASIC15.69■□□□□ 0.1
PTCD2Q8WV60 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AGAP7P-201ENST00000582299 2062 ntBASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AGAP14-201ENST00000624701 2060 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms