Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 SPDYE11-202ENST00000450699 704 ntBASIC13.41□□□□□ -0.26
CCDC107Q8WV48 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 SPDYE9P-201ENST00000570642 692 ntBASIC13.41□□□□□ -0.26
CCDC107Q8WV48 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 SPDYE10P-202ENST00000612005 668 ntBASIC13.41□□□□□ -0.26
CCDC107Q8WV48 SPDYE8P-202ENST00000612377 668 ntBASIC13.41□□□□□ -0.26
CCDC107Q8WV48 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 AC092902.6-201ENST00000641783 218 ntBASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 AC018892.3-201ENST00000623986 2499 ntBASIC13.41□□□□□ -0.26
CCDC107Q8WV48 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.41□□□□□ -0.26
CCDC107Q8WV48 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 AC023024.2-201ENST00000623561 1993 ntBASIC13.41□□□□□ -0.26
CCDC107Q8WV48 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC107Q8WV48 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 FOXO1B-201ENST00000504678 1527 ntBASIC13.4□□□□□ -0.26
CCDC107Q8WV48 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AL645939.2-201ENST00000427340 991 ntBASIC13.4□□□□□ -0.26
CCDC107Q8WV48 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 POLD2P1-201ENST00000511220 997 ntBASIC13.4□□□□□ -0.26
CCDC107Q8WV48 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AC073389.1-201ENST00000595595 795 ntBASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AC008267.7-201ENST00000624570 1194 ntBASIC13.4□□□□□ -0.26
CCDC107Q8WV48 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 AC117489.1-201ENST00000625169 3217 ntBASIC13.4□□□□□ -0.26
CCDC107Q8WV48 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms