Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PIK3C3Q8NEB9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 KRT18P13-201ENST00000400056 1290 ntBASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 RPSAP43-201ENST00000402237 625 ntBASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 AC112482.1-201ENST00000492080 688 ntBASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 HNRNPUP1-201ENST00000554987 333 ntBASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 KRT8P23-201ENST00000560090 1207 ntBASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 MIR4469-201ENST00000583919 79 ntBASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PIK3C3Q8NEB9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 HLA-H-201ENST00000383620 1096 ntBASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AC079140.1-201ENST00000508039 487 ntBASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AC243562.1-201ENST00000560672 389 ntBASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AP000842.3-202ENST00000569238 1080 ntBASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.51□□□□□ -0.09
PIK3C3Q8NEB9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.5□□□□□ -0.09
PIK3C3Q8NEB9 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PIK3C3Q8NEB9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PIK3C3Q8NEB9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms