Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 DFFBP1-201ENST00000433250 979 ntBASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 FAM207CP-201ENST00000443486 507 ntBASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 BCRP1-201ENST00000444246 691 ntBASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 AC104596.2-201ENST00000512793 793 ntBASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 AC026410.3-201ENST00000514280 936 ntBASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 SPCS2P1-201ENST00000561636 679 ntBASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 AL662799.1-202ENST00000614205 422 ntBASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 MYO15B-237ENST00000642007 4893 ntBASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 AL391825.1-201ENST00000457671 1364 ntBASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 VDAC1P7-201ENST00000462417 847 ntBASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 AC107373.2-201ENST00000607735 490 ntBASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 AC004233.3-201ENST00000607794 1269 ntBASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35BQ8NCS4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms