Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 AL121723.1-201ENST00000445194 1519 ntBASIC16.76■□□□□ 0.27
VPS52Q8N1B4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 AC016694.1-201ENST00000434179 700 ntBASIC16.76■□□□□ 0.27
VPS52Q8N1B4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 AC097359.3-201ENST00000603982 1210 ntBASIC16.76■□□□□ 0.27
VPS52Q8N1B4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 LINC02447-202ENST00000501888 2146 ntBASIC16.76■□□□□ 0.27
VPS52Q8N1B4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS52Q8N1B4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AC092384.3-202ENST00000564646 2873 ntBASIC16.75■□□□□ 0.27
VPS52Q8N1B4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 KRT18P43-201ENST00000469825 1281 ntBASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AC106760.1-201ENST00000508690 800 ntBASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AC000095.1-201ENST00000603208 874 ntBASIC16.75■□□□□ 0.27
VPS52Q8N1B4 AL606495.2-201ENST00000605867 535 ntBASIC16.75■□□□□ 0.27
VPS52Q8N1B4 MIR6787-201ENST00000616675 61 ntBASIC16.75■□□□□ 0.27
VPS52Q8N1B4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 KRT8P44-201ENST00000441609 1350 ntBASIC16.75■□□□□ 0.27
VPS52Q8N1B4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms