Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SIX5Q8N196 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 AC105020.1-201ENST00000435356 2205 ntBASIC15.79■□□□□ 0.12
SIX5Q8N196 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX5Q8N196 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX5Q8N196 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX5Q8N196 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX5Q8N196 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.79■□□□□ 0.12
SIX5Q8N196 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.79■□□□□ 0.12
SIX5Q8N196 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SIX5Q8N196 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.79■□□□□ 0.12
SIX5Q8N196 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX5Q8N196 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.79■□□□□ 0.12
SIX5Q8N196 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SIX5Q8N196 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
SIX5Q8N196 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX5Q8N196 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.79■□□□□ 0.12
SIX5Q8N196 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX5Q8N196 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.78■□□□□ 0.12
SIX5Q8N196 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SIX5Q8N196 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SIX5Q8N196 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SIX5Q8N196 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SIX5Q8N196 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 EEF1DP6-201ENST00000449232 372 ntBASIC15.78■□□□□ 0.12
SIX5Q8N196 AC114812.1-204ENST00000449669 728 ntBASIC15.78■□□□□ 0.12
SIX5Q8N196 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 AC008267.1-201ENST00000474858 1069 ntBASIC15.78■□□□□ 0.12
SIX5Q8N196 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.78■□□□□ 0.12
SIX5Q8N196 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.78■□□□□ 0.12
SIX5Q8N196 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.78■□□□□ 0.12
SIX5Q8N196 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.78■□□□□ 0.12
SIX5Q8N196 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.78■□□□□ 0.12
SIX5Q8N196 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.78■□□□□ 0.12
SIX5Q8N196 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.78■□□□□ 0.12
SIX5Q8N196 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SIX5Q8N196 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.78■□□□□ 0.12
SIX5Q8N196 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.78■□□□□ 0.12
SIX5Q8N196 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.78■□□□□ 0.12
SIX5Q8N196 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX5Q8N196 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.78■□□□□ 0.12
SIX5Q8N196 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.78■□□□□ 0.12
SIX5Q8N196 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SIX5Q8N196 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms