Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 BUD31-205ENST00000456893 512 ntTSL 5 BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.71■□□□□ 0.91
XRN1Q8IZH2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 CYP2T1P-202ENST00000641596 2535 ntBASIC20.71■□□□□ 0.91
XRN1Q8IZH2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XRN1Q8IZH2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.7■□□□□ 0.91
XRN1Q8IZH2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 SIGLEC18P-201ENST00000602271 909 ntBASIC20.7■□□□□ 0.9
XRN1Q8IZH2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 AL662844.4-201ENST00000606367 2838 ntBASIC20.7■□□□□ 0.9
XRN1Q8IZH2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 FZD10-202ENST00000539839 3282 ntBASIC20.7■□□□□ 0.9
XRN1Q8IZH2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 AC087392.5-201ENST00000612517 489 ntBASIC20.7■□□□□ 0.9
XRN1Q8IZH2 AC027601.3-201ENST00000622907 509 ntBASIC20.7■□□□□ 0.9
XRN1Q8IZH2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRN1Q8IZH2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 KRT8P28-201ENST00000433288 1390 ntBASIC20.69■□□□□ 0.9
XRN1Q8IZH2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 BANF1P3-201ENST00000412556 261 ntBASIC20.69■□□□□ 0.9
XRN1Q8IZH2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 AL512306.1-201ENST00000432698 848 ntBASIC20.69■□□□□ 0.9
XRN1Q8IZH2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 LINC01815-202ENST00000641468 1409 ntBASIC20.69■□□□□ 0.9
XRN1Q8IZH2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
XRN1Q8IZH2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC20.68■□□□□ 0.9
XRN1Q8IZH2 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms