Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS3Q8IXF0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.13
NPAS3Q8IXF0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS3Q8IXF0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS3Q8IXF0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS3Q8IXF0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS3Q8IXF0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 SERPINA13P-202ENST00000478994 924 ntBASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 CHMP4BP1-201ENST00000556017 588 ntBASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AC106820.3-201ENST00000561653 397 ntBASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AC005730.2-201ENST00000564549 1184 ntBASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AC016629.1-201ENST00000596579 586 ntBASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AP001002.3-201ENST00000623482 206 ntBASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS3Q8IXF0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AP003680.1-201ENST00000598970 3660 ntBASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AL603764.1-201ENST00000636452 321 ntBASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS3Q8IXF0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms