Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 AL133267.1-201ENST00000398220 340 ntBASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 RPL17P11-201ENST00000417593 544 ntBASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 HSPB1P2-201ENST00000448722 546 ntBASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 AC008894.3-201ENST00000624324 3103 ntBASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 AC000095.1-201ENST00000603208 874 ntBASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RP1L1Q8IWN7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AC134698.3-201ENST00000523880 214 ntBASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AC138649.2-201ENST00000615886 705 ntBASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AC104784.1-201ENST00000473096 294 ntBASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 RPSAP36-202ENST00000494591 1261 ntBASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 AC015910.1-201ENST00000579400 975 ntBASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 MIR4741-201ENST00000579822 90 ntBASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.97□□□□□ -0.17
RP1L1Q8IWN7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RP1L1Q8IWN7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.96□□□□□ -0.17
RP1L1Q8IWN7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RP1L1Q8IWN7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RP1L1Q8IWN7 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RP1L1Q8IWN7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms