Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 MROH4P-201ENST00000431302 1578 ntBASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 AC099063.4-201ENST00000641099 1602 ntBASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 TREML5P-201ENST00000421694 576 ntBASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 FAM86GP-201ENST00000448322 971 ntBASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 AC044860.1-202ENST00000559481 777 ntBASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 AC140878.1-201ENST00000565277 250 ntBASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00346Q8IVM7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AL359258.3-201ENST00000622910 2331 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AL133267.1-201ENST00000398220 340 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC092580.3-201ENST00000430932 139 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms