Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.94■□□□□ 0.62
COL23A1Q86Y22 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 DNM1P51-201ENST00000558149 522 ntBASIC18.94■□□□□ 0.62
COL23A1Q86Y22 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 AC009884.2-201ENST00000603110 324 ntBASIC18.94■□□□□ 0.62
COL23A1Q86Y22 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 AL360270.3-201ENST00000609118 1348 ntBASIC18.94■□□□□ 0.62
COL23A1Q86Y22 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 CHCHD2P9-201ENST00000461726 456 ntBASIC18.93■□□□□ 0.62
COL23A1Q86Y22 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 AC107464.3-201ENST00000609172 737 ntBASIC18.93■□□□□ 0.62
COL23A1Q86Y22 MIR6720-201ENST00000611664 98 ntBASIC18.93■□□□□ 0.62
COL23A1Q86Y22 FO393412.1-201ENST00000619841 382 ntBASIC18.93■□□□□ 0.62
COL23A1Q86Y22 AC005618.3-201ENST00000624928 458 ntBASIC18.93■□□□□ 0.62
COL23A1Q86Y22 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 AC127383.1-201ENST00000444697 1800 ntBASIC18.93■□□□□ 0.62
COL23A1Q86Y22 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL23A1Q86Y22 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 AL596087.1-201ENST00000400979 1969 ntBASIC18.92■□□□□ 0.62
COL23A1Q86Y22 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 MIR557-201ENST00000385239 98 ntBASIC18.92■□□□□ 0.62
COL23A1Q86Y22 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 AC084781.1-201ENST00000613737 656 ntBASIC18.92■□□□□ 0.62
COL23A1Q86Y22 AC148477.9-201ENST00000623974 539 ntBASIC18.92■□□□□ 0.62
COL23A1Q86Y22 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms