Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 AC136759.1-202ENST00000530858 2194 ntBASIC13.79□□□□□ -0.2
LRRC28Q86X40 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 AC073439.1-201ENST00000624121 1774 ntBASIC13.78□□□□□ -0.2
LRRC28Q86X40 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 HSPA7-201ENST00000445535 1927 ntBASIC13.78□□□□□ -0.2
LRRC28Q86X40 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 RFPL4AP1-201ENST00000530883 850 ntBASIC13.78□□□□□ -0.2
LRRC28Q86X40 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 ALG1L8P-201ENST00000533887 760 ntBASIC13.78□□□□□ -0.2
LRRC28Q86X40 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms