Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13CQ709C8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13CQ709C8 FKBP4P6-201ENST00000457486 1332 ntBASIC12.51□□□□□ -0.41
VPS13CQ709C8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.51□□□□□ -0.41
VPS13CQ709C8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13CQ709C8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13CQ709C8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
VPS13CQ709C8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13CQ709C8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
VPS13CQ709C8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 MRPL22P1-201ENST00000505398 616 ntBASIC12.5□□□□□ -0.41
VPS13CQ709C8 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 CR383656.3-201ENST00000551315 183 ntBASIC12.5□□□□□ -0.41
VPS13CQ709C8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 DUX4L46-201ENST00000566845 751 ntBASIC12.5□□□□□ -0.41
VPS13CQ709C8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 RBM8B-201ENST00000555532 525 ntBASIC12.5□□□□□ -0.41
VPS13CQ709C8 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 AP000845.1-201ENST00000581677 2131 ntBASIC12.5□□□□□ -0.41
VPS13CQ709C8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 AL627422.1-201ENST00000434104 580 ntBASIC12.5□□□□□ -0.41
VPS13CQ709C8 FAM58BP-201ENST00000439056 645 ntBASIC12.5□□□□□ -0.41
VPS13CQ709C8 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.5□□□□□ -0.41
VPS13CQ709C8 MIR4522-201ENST00000584932 87 ntBASIC12.5□□□□□ -0.41
VPS13CQ709C8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13CQ709C8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 AC239868.1-201ENST00000369385 493 ntBASIC12.49□□□□□ -0.41
VPS13CQ709C8 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 AC130709.1-201ENST00000484779 1212 ntBASIC12.49□□□□□ -0.41
VPS13CQ709C8 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 ALG1L13P-202ENST00000519320 584 ntBASIC12.49□□□□□ -0.41
VPS13CQ709C8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 AL136295.7-201ENST00000619226 1200 ntBASIC12.49□□□□□ -0.41
VPS13CQ709C8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 MTHFR-217ENST00000641820 1569 ntBASIC12.49□□□□□ -0.41
VPS13CQ709C8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 RN7SL163P-201ENST00000583100 276 ntBASIC12.49□□□□□ -0.41
VPS13CQ709C8 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 AC020916.1-201ENST00000587762 1774 ntBASIC12.49□□□□□ -0.41
VPS13CQ709C8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 AL512430.1-201ENST00000392575 860 ntBASIC12.49□□□□□ -0.41
VPS13CQ709C8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VPS13CQ709C8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13CQ709C8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms