Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 SAMD11P1-201ENST00000571429 661 ntBASIC18.26■□□□□ 0.51
CTR9Q6PD62 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTR9Q6PD62 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTR9Q6PD62 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTR9Q6PD62 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTR9Q6PD62 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTR9Q6PD62 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTR9Q6PD62 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTR9Q6PD62 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTR9Q6PD62 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTR9Q6PD62 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 AC114812.1-204ENST00000449669 728 ntBASIC18.25■□□□□ 0.51
CTR9Q6PD62 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 AC145423.3-201ENST00000615987 467 ntBASIC18.25■□□□□ 0.51
CTR9Q6PD62 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 SSR4P1-203ENST00000599569 2260 ntBASIC18.25■□□□□ 0.51
CTR9Q6PD62 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.25■□□□□ 0.51
CTR9Q6PD62 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTR9Q6PD62 KRT8P35-201ENST00000483942 1338 ntBASIC18.24■□□□□ 0.51
CTR9Q6PD62 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 AC112693.3-201ENST00000624819 1983 ntBASIC18.24■□□□□ 0.51
CTR9Q6PD62 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 NUS1P3-201ENST00000423502 862 ntBASIC18.24■□□□□ 0.51
CTR9Q6PD62 CTBP2P5-201ENST00000454986 1264 ntBASIC18.24■□□□□ 0.51
CTR9Q6PD62 AC104989.1-201ENST00000519711 778 ntBASIC18.24■□□□□ 0.51
CTR9Q6PD62 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 COX11-210ENST00000639671 696 ntBASIC18.24■□□□□ 0.51
CTR9Q6PD62 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CTR9Q6PD62 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTR9Q6PD62 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms