Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 FO681548.1-201ENST00000455617 1132 ntBASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 PRSS30P-206ENST00000641773 873 ntBASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC127383.1-201ENST00000444697 1800 ntBASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC010491.1-201ENST00000563101 2797 ntBASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC084364.1-201ENST00000551967 1556 ntBASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC126755.1-201ENST00000525846 6405 ntBASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 CNN2P8-201ENST00000421872 913 ntBASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3F3CQ6NXT2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 AL645937.2-201ENST00000396808 931 ntBASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 CSF2RBP1-201ENST00000447905 391 ntBASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 AC114812.1-204ENST00000449669 728 ntBASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms