Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SALL4P5-201ENST00000419001 1760 ntBASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 MIR557-201ENST00000385239 98 ntBASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 MIR3188-201ENST00000583494 85 ntBASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AC009884.2-201ENST00000603110 324 ntBASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 TMBIM7P-202ENST00000641474 1516 ntBASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AC007292.2-201ENST00000593524 1812 ntBASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 KRT8P28-201ENST00000433288 1390 ntBASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 AC074138.1-201ENST00000611182 1303 ntBASIC22.62■■□□□ 1.21
CDC42BPAQ5VT25 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 FAM90A2P-201ENST00000511144 1395 ntBASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 FAM90A25P-201ENST00000528404 1395 ntBASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 RPL18AP3-201ENST00000462885 528 ntBASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPAQ5VT25 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 MIR4522-201ENST00000584932 87 ntBASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 AC020658.6-201ENST00000623564 1870 ntBASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 NAT9-220ENST00000582870 896 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms