Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC93Q567U6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC93Q567U6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC93Q567U6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CCDC93Q567U6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CCDC93Q567U6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 AC022616.1-201ENST00000518688 554 ntBASIC18.76■□□□□ 0.59
CCDC93Q567U6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 BNIP3P13-201ENST00000599968 566 ntBASIC18.76■□□□□ 0.59
CCDC93Q567U6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 AP000346.4-201ENST00000614827 381 ntBASIC18.76■□□□□ 0.59
CCDC93Q567U6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 AL805961.1-203ENST00000641078 1258 ntBASIC18.76■□□□□ 0.59
CCDC93Q567U6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC93Q567U6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
CCDC93Q567U6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 AC234782.1-201ENST00000451950 919 ntBASIC18.75■□□□□ 0.59
CCDC93Q567U6 RNMTL1P1-201ENST00000454103 560 ntBASIC18.75■□□□□ 0.59
CCDC93Q567U6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 AF254983.2-201ENST00000612331 135 ntBASIC18.75■□□□□ 0.59
CCDC93Q567U6 AP003419.4-201ENST00000616071 517 ntBASIC18.75■□□□□ 0.59
CCDC93Q567U6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC93Q567U6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC93Q567U6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC93Q567U6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC93Q567U6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CCDC93Q567U6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC93Q567U6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC93Q567U6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC93Q567U6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC93Q567U6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC93Q567U6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC93Q567U6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC93Q567U6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC93Q567U6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC93Q567U6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC93Q567U6 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.74■□□□□ 0.59
CCDC93Q567U6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC93Q567U6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC93Q567U6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms