Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 CYP4F24P-201ENST00000586049 1580 ntBASIC13.87□□□□□ -0.19
CCDC58Q4VC31 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 AKAP8P1-201ENST00000434743 1349 ntBASIC13.87□□□□□ -0.19
CCDC58Q4VC31 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC58Q4VC31 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 AC112191.1-201ENST00000523689 701 ntBASIC13.86□□□□□ -0.19
CCDC58Q4VC31 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 AL049840.3-201ENST00000602669 611 ntBASIC13.86□□□□□ -0.19
CCDC58Q4VC31 AC026979.3-201ENST00000607315 403 ntBASIC13.86□□□□□ -0.19
CCDC58Q4VC31 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 AC008267.7-201ENST00000624570 1194 ntBASIC13.86□□□□□ -0.19
CCDC58Q4VC31 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC58Q4VC31 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 CICP11-201ENST00000434745 2827 ntBASIC13.85□□□□□ -0.19
CCDC58Q4VC31 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 AC074386.1-202ENST00000463561 864 ntBASIC13.85□□□□□ -0.19
CCDC58Q4VC31 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 RNA5SP410-201ENST00000516285 106 ntBASIC13.85□□□□□ -0.19
CCDC58Q4VC31 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 AC097359.3-201ENST00000603982 1210 ntBASIC13.85□□□□□ -0.19
CCDC58Q4VC31 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms