Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRFAM7AQ494W8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHRFAM7AQ494W8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CHRFAM7AQ494W8 AL391825.1-201ENST00000457671 1364 ntBASIC13.58□□□□□ -0.23
CHRFAM7AQ494W8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CHRFAM7AQ494W8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CHRFAM7AQ494W8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.58□□□□□ -0.23
CHRFAM7AQ494W8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.58□□□□□ -0.23
CHRFAM7AQ494W8 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CHRFAM7AQ494W8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 MIR1909-201ENST00000411312 80 ntBASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 ACA64.2-201ENST00000459014 129 ntBASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 API5-211ENST00000534695 560 ntTSL 5 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 RAB43P1-201ENST00000561790 589 ntBASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 AC087499.5-201ENST00000452760 1342 ntBASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 CETN4P-206ENST00000642099 2168 ntBASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 AP3S2-216ENST00000617003 1561 ntBASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRFAM7AQ494W8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 DFFBP1-201ENST00000433250 979 ntBASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRFAM7AQ494W8 AC009477.1-201ENST00000452936 217 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms