Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.38■□□□□ 0.21
ERCC6LQ2NKX8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC6LQ2NKX8 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC6LQ2NKX8 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC6LQ2NKX8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC6LQ2NKX8 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC6LQ2NKX8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 AC083964.2-201ENST00000623988 2396 ntBASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 AC138894.3-201ENST00000603787 634 ntBASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 AL078644.1-201ENST00000609881 752 ntBASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 PMS2P7-201ENST00000506558 1336 ntBASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ERCC6LQ2NKX8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 FAM185BP-201ENST00000443595 716 ntBASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 OR7E47P-204ENST00000575924 449 ntBASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ERCC6LQ2NKX8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
ERCC6LQ2NKX8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ERCC6LQ2NKX8 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC6LQ2NKX8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ERCC6LQ2NKX8 AC087386.2-201ENST00000623212 4637 ntBASIC16.35■□□□□ 0.21
ERCC6LQ2NKX8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ERCC6LQ2NKX8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ERCC6LQ2NKX8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ERCC6LQ2NKX8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms