Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC27Q2M243 KRT8P35-201ENST00000483942 1338 ntBASIC19.93■□□□□ 0.78
CCDC27Q2M243 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC27Q2M243 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC27Q2M243 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC27Q2M243 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC27Q2M243 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC27Q2M243 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 KRT18P25-201ENST00000508931 1278 ntBASIC19.92■□□□□ 0.78
CCDC27Q2M243 AP001889.1-201ENST00000525414 633 ntBASIC19.92■□□□□ 0.78
CCDC27Q2M243 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 PTP4A1P2-201ENST00000546033 454 ntBASIC19.92■□□□□ 0.78
CCDC27Q2M243 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 LINC00554-201ENST00000564841 3011 ntBASIC19.92■□□□□ 0.78
CCDC27Q2M243 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC27Q2M243 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC27Q2M243 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 LINC01101-201ENST00000622953 1884 ntBASIC19.91■□□□□ 0.78
CCDC27Q2M243 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 AC132938.2-201ENST00000579188 680 ntBASIC19.91■□□□□ 0.78
CCDC27Q2M243 GNRHR2-203ENST00000581100 1187 ntBASIC19.91■□□□□ 0.78
CCDC27Q2M243 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 AL591163.1-201ENST00000641757 987 ntBASIC19.91■□□□□ 0.78
CCDC27Q2M243 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 AC134312.5-201ENST00000568031 1313 ntBASIC19.91■□□□□ 0.78
CCDC27Q2M243 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 AC013726.1-201ENST00000563747 2285 ntBASIC19.91■□□□□ 0.78
CCDC27Q2M243 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC27Q2M243 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC27Q2M243 AL138709.1-201ENST00000614840 1693 ntBASIC19.91■□□□□ 0.78
CCDC27Q2M243 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms