Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDH1Q08174 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDH1Q08174 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDH1Q08174 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 SPDYE18-201ENST00000510091 1050 ntBASIC14.88□□□□□ -0.03
PCDH1Q08174 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDH1Q08174 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDH1Q08174 AC005498.2-205ENST00000593218 784 ntBASIC14.88□□□□□ -0.03
PCDH1Q08174 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDH1Q08174 AC013726.1-201ENST00000563747 2285 ntBASIC14.88□□□□□ -0.03
PCDH1Q08174 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PCDH1Q08174 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 CLK3P2-201ENST00000427566 1453 ntBASIC14.88□□□□□ -0.03
PCDH1Q08174 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDH1Q08174 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDH1Q08174 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDH1Q08174 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDH1Q08174 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDH1Q08174 CYMP-203ENST00000474680 1263 ntBASIC14.87□□□□□ -0.03
PCDH1Q08174 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 AC026410.3-201ENST00000514280 936 ntBASIC14.87□□□□□ -0.03
PCDH1Q08174 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PCDH1Q08174 SAMD11P1-201ENST00000571429 661 ntBASIC14.87□□□□□ -0.03
PCDH1Q08174 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDH1Q08174 AC099568.2-201ENST00000609194 695 ntBASIC14.87□□□□□ -0.03
PCDH1Q08174 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDH1Q08174 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDH1Q08174 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 REXO1L4P-201ENST00000605109 1937 ntBASIC14.87□□□□□ -0.03
PCDH1Q08174 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDH1Q08174 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PCDH1Q08174 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDH1Q08174 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PCDH1Q08174 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDH1Q08174 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDH1Q08174 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH1Q08174 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDH1Q08174 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
PCDH1Q08174 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PCDH1Q08174 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDH1Q08174 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDH1Q08174 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDH1Q08174 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCDH1Q08174 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDH1Q08174 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDH1Q08174 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCDH1Q08174 DRD5P1-201ENST00000456605 1438 ntBASIC14.86□□□□□ -0.03
PCDH1Q08174 ACE3P-201ENST00000423435 1973 ntBASIC14.86□□□□□ -0.03
PCDH1Q08174 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDH1Q08174 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDH1Q08174 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDH1Q08174 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PCDH1Q08174 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms