Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.66□□□□□ -0.06
CHRNB3Q05901 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 MKNK2P1-201ENST00000437526 628 ntBASIC14.66□□□□□ -0.06
CHRNB3Q05901 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 AC004877.2-201ENST00000623941 599 ntBASIC14.66□□□□□ -0.06
CHRNB3Q05901 AC134684.3-201ENST00000641758 218 ntBASIC14.66□□□□□ -0.06
CHRNB3Q05901 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 LINC01230-201ENST00000625222 3017 ntBASIC14.66□□□□□ -0.06
CHRNB3Q05901 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 AL136982.4-201ENST00000437689 1740 ntBASIC14.66□□□□□ -0.06
CHRNB3Q05901 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 BX640514.1-201ENST00000583223 1918 ntBASIC14.65□□□□□ -0.06
CHRNB3Q05901 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 AC105233.2-201ENST00000523697 349 ntBASIC14.65□□□□□ -0.06
CHRNB3Q05901 AF228730.5-201ENST00000530288 346 ntBASIC14.65□□□□□ -0.06
CHRNB3Q05901 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 SNHG9-202ENST00000564014 471 ntBASIC14.65□□□□□ -0.06
CHRNB3Q05901 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNB3Q05901 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNB3Q05901 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
CHRNB3Q05901 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.07
CHRNB3Q05901 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
CHRNB3Q05901 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms