Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNA1P78396 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.35■□□□□ 0.37
CCNA1P78396 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNA1P78396 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCNA1P78396 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CCNA1P78396 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCNA1P78396 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCNA1P78396 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCNA1P78396 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 FXNP2-201ENST00000411625 547 ntBASIC17.34■□□□□ 0.37
CCNA1P78396 GHSR-202ENST00000427970 912 ntBASIC17.34■□□□□ 0.37
CCNA1P78396 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.34■□□□□ 0.37
CCNA1P78396 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.34■□□□□ 0.37
CCNA1P78396 MPRIPP1-201ENST00000452433 1089 ntBASIC17.34■□□□□ 0.37
CCNA1P78396 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.34■□□□□ 0.37
CCNA1P78396 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.34■□□□□ 0.37
CCNA1P78396 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.34■□□□□ 0.37
CCNA1P78396 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.34■□□□□ 0.37
CCNA1P78396 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.34■□□□□ 0.37
CCNA1P78396 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNA1P78396 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNA1P78396 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCNA1P78396 AC026740.1-201ENST00000607068 791 ntBASIC17.34■□□□□ 0.37
CCNA1P78396 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.34■□□□□ 0.37
CCNA1P78396 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.34■□□□□ 0.37
CCNA1P78396 AL136295.7-201ENST00000619226 1200 ntBASIC17.34■□□□□ 0.37
CCNA1P78396 AL353726.2-201ENST00000623259 884 ntBASIC17.34■□□□□ 0.37
CCNA1P78396 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNA1P78396 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.34■□□□□ 0.37
CCNA1P78396 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCNA1P78396 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNA1P78396 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CCNA1P78396 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCNA1P78396 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNA1P78396 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CCNA1P78396 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNA1P78396 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.33■□□□□ 0.37
CCNA1P78396 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNA1P78396 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.33■□□□□ 0.37
CCNA1P78396 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNA1P78396 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.33■□□□□ 0.37
CCNA1P78396 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNA1P78396 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNA1P78396 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNA1P78396 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.33■□□□□ 0.37
CCNA1P78396 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNA1P78396 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNA1P78396 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCNA1P78396 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNA1P78396 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNA1P78396 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 RNMTL1P1-201ENST00000454103 560 ntBASIC17.33■□□□□ 0.36
CCNA1P78396 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.33■□□□□ 0.36
CCNA1P78396 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.33■□□□□ 0.36
CCNA1P78396 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.33■□□□□ 0.36
CCNA1P78396 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CCNA1P78396 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.33■□□□□ 0.36
CCNA1P78396 AL136301.1-201ENST00000615830 422 ntBASIC17.33■□□□□ 0.36
CCNA1P78396 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 AP003680.1-201ENST00000598970 3660 ntBASIC17.33■□□□□ 0.36
CCNA1P78396 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CCNA1P78396 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNA1P78396 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNA1P78396 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCNA1P78396 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CCNA1P78396 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNA1P78396 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNA1P78396 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNA1P78396 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNA1P78396 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCNA1P78396 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNA1P78396 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
CCNA1P78396 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNA1P78396 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNA1P78396 REXO1L5P-201ENST00000622260 2098 ntBASIC17.32■□□□□ 0.36
CCNA1P78396 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNA1P78396 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCNA1P78396 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms