Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCR4P61073 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCR4P61073 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCR4P61073 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCR4P61073 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CXCR4P61073 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CXCR4P61073 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CXCR4P61073 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCR4P61073 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CXCR4P61073 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CXCR4P61073 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.07□□□□□ -0.16
CXCR4P61073 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCR4P61073 RNA5SP410-201ENST00000516285 106 ntBASIC14.07□□□□□ -0.16
CXCR4P61073 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.07□□□□□ -0.16
CXCR4P61073 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CXCR4P61073 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.07□□□□□ -0.16
CXCR4P61073 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.07□□□□□ -0.16
CXCR4P61073 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.07□□□□□ -0.16
CXCR4P61073 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.07□□□□□ -0.16
CXCR4P61073 CYP4F24P-201ENST00000586049 1580 ntBASIC14.07□□□□□ -0.16
CXCR4P61073 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
CXCR4P61073 AC089987.1-201ENST00000551654 2209 ntBASIC14.07□□□□□ -0.16
CXCR4P61073 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CXCR4P61073 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCR4P61073 AC012508.2-201ENST00000567613 1472 ntBASIC14.06□□□□□ -0.16
CXCR4P61073 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.06□□□□□ -0.16
CXCR4P61073 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.06□□□□□ -0.16
CXCR4P61073 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CXCR4P61073 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CXCR4P61073 AL607033.1-201ENST00000623900 1599 ntBASIC14.06□□□□□ -0.16
CXCR4P61073 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CXCR4P61073 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.06□□□□□ -0.16
CXCR4P61073 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CXCR4P61073 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.06□□□□□ -0.16
CXCR4P61073 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
CXCR4P61073 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.06□□□□□ -0.16
CXCR4P61073 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCR4P61073 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CXCR4P61073 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.06□□□□□ -0.16
CXCR4P61073 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CXCR4P61073 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.06□□□□□ -0.16
CXCR4P61073 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCR4P61073 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms