Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.77□□□□□ -0.05
VSX2P58304 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.77□□□□□ -0.05
VSX2P58304 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.77□□□□□ -0.05
VSX2P58304 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.77□□□□□ -0.05
VSX2P58304 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
VSX2P58304 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.77□□□□□ -0.05
VSX2P58304 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.77□□□□□ -0.05
VSX2P58304 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
VSX2P58304 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.76□□□□□ -0.05
VSX2P58304 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
VSX2P58304 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.76□□□□□ -0.05
VSX2P58304 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.76□□□□□ -0.05
VSX2P58304 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 AP001582.1-201ENST00000525856 295 ntBASIC14.76□□□□□ -0.05
VSX2P58304 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VSX2P58304 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.76□□□□□ -0.05
VSX2P58304 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
VSX2P58304 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VSX2P58304 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VSX2P58304 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
VSX2P58304 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.76□□□□□ -0.05
VSX2P58304 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VSX2P58304 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.75□□□□□ -0.05
VSX2P58304 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VSX2P58304 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VSX2P58304 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 AL138799.1-201ENST00000448213 1675 ntBASIC14.75□□□□□ -0.05
VSX2P58304 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.75□□□□□ -0.05
VSX2P58304 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.75□□□□□ -0.05
VSX2P58304 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
VSX2P58304 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.75□□□□□ -0.05
VSX2P58304 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.75□□□□□ -0.05
VSX2P58304 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
VSX2P58304 RPL5P21-201ENST00000404620 815 ntBASIC14.75□□□□□ -0.05
VSX2P58304 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.75□□□□□ -0.05
VSX2P58304 TMEM14DP-201ENST00000422205 345 ntBASIC14.75□□□□□ -0.05
VSX2P58304 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms