Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.08■□□□□ 0.81
RIPK4P57078 MIR1909-201ENST00000411312 80 ntBASIC20.08■□□□□ 0.81
RIPK4P57078 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.08■□□□□ 0.81
RIPK4P57078 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK4P57078 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RIPK4P57078 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK4P57078 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK4P57078 SNX29P1-201ENST00000548357 1007 ntBASIC20.08■□□□□ 0.81
RIPK4P57078 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK4P57078 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK4P57078 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.08■□□□□ 0.81
RIPK4P57078 AC244669.2-201ENST00000612320 853 ntBASIC20.08■□□□□ 0.81
RIPK4P57078 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK4P57078 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK4P57078 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RIPK4P57078 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK4P57078 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.08■□□□□ 0.8
RIPK4P57078 KRT8P14-201ENST00000414254 1442 ntBASIC20.08■□□□□ 0.8
RIPK4P57078 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK4P57078 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK4P57078 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK4P57078 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.08■□□□□ 0.8
RIPK4P57078 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RIPK4P57078 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK4P57078 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.08■□□□□ 0.8
RIPK4P57078 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK4P57078 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
RIPK4P57078 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
RIPK4P57078 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.07■□□□□ 0.8
RIPK4P57078 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RIPK4P57078 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.07■□□□□ 0.8
RIPK4P57078 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.07■□□□□ 0.8
RIPK4P57078 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.07■□□□□ 0.8
RIPK4P57078 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.07■□□□□ 0.8
RIPK4P57078 AC012508.2-201ENST00000567613 1472 ntBASIC20.07■□□□□ 0.8
RIPK4P57078 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.07■□□□□ 0.8
RIPK4P57078 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.07■□□□□ 0.8
RIPK4P57078 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
RIPK4P57078 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 AC091951.1-201ENST00000512854 2465 ntBASIC20.07■□□□□ 0.8
RIPK4P57078 ANKRD19P-201ENST00000338192 862 ntBASIC20.07■□□□□ 0.8
RIPK4P57078 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.07■□□□□ 0.8
RIPK4P57078 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RIPK4P57078 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.07■□□□□ 0.8
RIPK4P57078 KRT43P-201ENST00000434019 910 ntBASIC20.07■□□□□ 0.8
RIPK4P57078 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.07■□□□□ 0.8
RIPK4P57078 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.07■□□□□ 0.8
RIPK4P57078 IGHV3-71-201ENST00000523324 359 ntBASIC20.07■□□□□ 0.8
RIPK4P57078 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RIPK4P57078 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.07■□□□□ 0.8
RIPK4P57078 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.07■□□□□ 0.8
RIPK4P57078 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.07■□□□□ 0.8
RIPK4P57078 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK4P57078 MROH4P-201ENST00000431302 1578 ntBASIC20.07■□□□□ 0.8
RIPK4P57078 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.07■□□□□ 0.8
RIPK4P57078 PDIA3P1-201ENST00000471856 1510 ntBASIC20.07■□□□□ 0.8
RIPK4P57078 AL138709.1-201ENST00000614840 1693 ntBASIC20.07■□□□□ 0.8
RIPK4P57078 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.06■□□□□ 0.8
RIPK4P57078 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RIPK4P57078 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RIPK4P57078 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.06■□□□□ 0.8
RIPK4P57078 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.06■□□□□ 0.8
RIPK4P57078 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.06■□□□□ 0.8
RIPK4P57078 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.06■□□□□ 0.8
RIPK4P57078 AC007551.1-201ENST00000457394 519 ntBASIC20.06■□□□□ 0.8
RIPK4P57078 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RIPK4P57078 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.06■□□□□ 0.8
RIPK4P57078 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.06■□□□□ 0.8
RIPK4P57078 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.06■□□□□ 0.8
RIPK4P57078 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms