Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.74□□□□□ -0.21
GFRA1P56159 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 EIF3FP3-201ENST00000434851 1086 ntBASIC13.74□□□□□ -0.21
GFRA1P56159 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.74□□□□□ -0.21
GFRA1P56159 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.74□□□□□ -0.21
GFRA1P56159 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.74□□□□□ -0.21
GFRA1P56159 FO681548.1-201ENST00000455617 1132 ntBASIC13.74□□□□□ -0.21
GFRA1P56159 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 AC022616.1-201ENST00000518688 554 ntBASIC13.74□□□□□ -0.21
GFRA1P56159 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.74□□□□□ -0.21
GFRA1P56159 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.74□□□□□ -0.21
GFRA1P56159 RN7SL48P-201ENST00000579283 293 ntBASIC13.74□□□□□ -0.21
GFRA1P56159 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 AC132872.4-202ENST00000622924 2756 ntBASIC13.74□□□□□ -0.21
GFRA1P56159 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.73□□□□□ -0.21
GFRA1P56159 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GFRA1P56159 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GFRA1P56159 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.73□□□□□ -0.21
GFRA1P56159 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
GFRA1P56159 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
GFRA1P56159 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.73□□□□□ -0.21
GFRA1P56159 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.73□□□□□ -0.21
GFRA1P56159 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.73□□□□□ -0.21
GFRA1P56159 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.73□□□□□ -0.21
GFRA1P56159 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.73□□□□□ -0.21
GFRA1P56159 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.73□□□□□ -0.21
GFRA1P56159 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.73□□□□□ -0.21
GFRA1P56159 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.73□□□□□ -0.21
GFRA1P56159 DUX4L47-201ENST00000566374 394 ntBASIC13.73□□□□□ -0.21
GFRA1P56159 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.73□□□□□ -0.21
GFRA1P56159 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.73□□□□□ -0.21
GFRA1P56159 RHOXF1P1-202ENST00000635473 501 ntBASIC13.73□□□□□ -0.21
GFRA1P56159 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.73□□□□□ -0.21
GFRA1P56159 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.73□□□□□ -0.21
GFRA1P56159 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFRA1P56159 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.73□□□□□ -0.21
GFRA1P56159 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms