Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC009486.1-201ENST00000569860 813 ntBASIC13.47□□□□□ -0.25
FOXG1P55316 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.47□□□□□ -0.25
FOXG1P55316 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.47□□□□□ -0.25
FOXG1P55316 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.47□□□□□ -0.25
FOXG1P55316 AP000845.1-201ENST00000581677 2131 ntBASIC13.47□□□□□ -0.25
FOXG1P55316 AC233724.13-201ENST00000598383 410 ntBASIC13.47□□□□□ -0.25
FOXG1P55316 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
FOXG1P55316 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 AC126365.1-201ENST00000578585 1514 ntBASIC13.47□□□□□ -0.25
FOXG1P55316 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
FOXG1P55316 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 AC022532.1-201ENST00000624563 1728 ntBASIC13.47□□□□□ -0.25
FOXG1P55316 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 AC126177.1-201ENST00000547829 2218 ntBASIC13.47□□□□□ -0.25
FOXG1P55316 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXG1P55316 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
FOXG1P55316 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.46□□□□□ -0.25
FOXG1P55316 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.46□□□□□ -0.25
FOXG1P55316 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
FOXG1P55316 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 ACKR1-201ENST00000368121 1240 ntBASIC13.46□□□□□ -0.25
FOXG1P55316 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
FOXG1P55316 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
FOXG1P55316 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.46□□□□□ -0.25
FOXG1P55316 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
FOXG1P55316 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.46□□□□□ -0.25
FOXG1P55316 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.46□□□□□ -0.25
FOXG1P55316 KLF2P2-201ENST00000416807 1039 ntBASIC13.46□□□□□ -0.25
FOXG1P55316 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.46□□□□□ -0.25
FOXG1P55316 HLA-K-203ENST00000430151 1046 ntBASIC13.46□□□□□ -0.25
FOXG1P55316 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.46□□□□□ -0.25
FOXG1P55316 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.46□□□□□ -0.25
FOXG1P55316 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 SNX29P1-201ENST00000548357 1007 ntBASIC13.46□□□□□ -0.25
FOXG1P55316 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.46□□□□□ -0.25
FOXG1P55316 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
FOXG1P55316 AL512343.1-201ENST00000605837 169 ntBASIC13.46□□□□□ -0.25
FOXG1P55316 AP005019.2-201ENST00000615104 511 ntBASIC13.46□□□□□ -0.25
FOXG1P55316 AL162274.1-201ENST00000617191 1098 ntBASIC13.46□□□□□ -0.25
FOXG1P55316 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.46□□□□□ -0.25
FOXG1P55316 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.46□□□□□ -0.25
FOXG1P55316 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
FOXG1P55316 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.46□□□□□ -0.25
FOXG1P55316 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXG1P55316 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
FOXG1P55316 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.46□□□□□ -0.26
FOXG1P55316 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.46□□□□□ -0.26
FOXG1P55316 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.46□□□□□ -0.26
FOXG1P55316 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
FOXG1P55316 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
FOXG1P55316 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
FOXG1P55316 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
FOXG1P55316 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
FOXG1P55316 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
FOXG1P55316 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms