Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH8P55286 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH8P55286 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH8P55286 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH8P55286 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDH8P55286 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH8P55286 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDH8P55286 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
CDH8P55286 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CDH8P55286 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH8P55286 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH8P55286 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH8P55286 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.39■□□□□ 0.22
CDH8P55286 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDH8P55286 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CDH8P55286 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH8P55286 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH8P55286 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDH8P55286 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 RNU1-114P-201ENST00000365297 166 ntBASIC16.39■□□□□ 0.21
CDH8P55286 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH8P55286 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH8P55286 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH8P55286 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH8P55286 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.39■□□□□ 0.21
CDH8P55286 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH8P55286 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDH8P55286 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH8P55286 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH8P55286 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH8P55286 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH8P55286 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH8P55286 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH8P55286 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 REXO1L2P-201ENST00000425429 2069 ntBASIC16.39■□□□□ 0.21
CDH8P55286 AC023157.3-201ENST00000619086 2088 ntBASIC16.39■□□□□ 0.21
CDH8P55286 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH8P55286 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH8P55286 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDH8P55286 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDH8P55286 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH8P55286 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH8P55286 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CDH8P55286 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH8P55286 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH8P55286 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH8P55286 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDH8P55286 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.38■□□□□ 0.21
CDH8P55286 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH8P55286 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH8P55286 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDH8P55286 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH8P55286 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDH8P55286 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDH8P55286 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH8P55286 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH8P55286 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH8P55286 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms