Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH4P55283 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 LRRC59-203ENST00000576448 1531 ntBASIC15.68■□□□□ 0.1
CDH4P55283 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDH4P55283 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH4P55283 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 WASH3P-207ENST00000560956 1394 ntBASIC15.68■□□□□ 0.1
CDH4P55283 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH4P55283 ACA64.2-201ENST00000459014 129 ntBASIC15.68■□□□□ 0.1
CDH4P55283 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH4P55283 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH4P55283 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH4P55283 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDH4P55283 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDH4P55283 AL512343.1-201ENST00000605837 169 ntBASIC15.68■□□□□ 0.1
CDH4P55283 AC145423.3-201ENST00000615987 467 ntBASIC15.68■□□□□ 0.1
CDH4P55283 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH4P55283 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDH4P55283 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH4P55283 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH4P55283 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH4P55283 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH4P55283 AC138035.3-201ENST00000622706 2791 ntBASIC15.68■□□□□ 0.1
CDH4P55283 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDH4P55283 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH4P55283 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH4P55283 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH4P55283 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH4P55283 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH4P55283 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 AL109954.1-202ENST00000564051 2148 ntBASIC15.67■□□□□ 0.1
CDH4P55283 HYMAI-201ENST00000635591 3347 ntBASIC15.67■□□□□ 0.1
CDH4P55283 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDH4P55283 HLA-K-203ENST00000430151 1046 ntBASIC15.67■□□□□ 0.1
CDH4P55283 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH4P55283 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDH4P55283 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH4P55283 CROCCP4-201ENST00000457096 498 ntBASIC15.67■□□□□ 0.1
CDH4P55283 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 AC022616.1-201ENST00000518688 554 ntBASIC15.67■□□□□ 0.1
CDH4P55283 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 HILS1-202ENST00000545329 423 ntBASIC15.67■□□□□ 0.1
CDH4P55283 GNRHR2-203ENST00000581100 1187 ntBASIC15.67■□□□□ 0.1
CDH4P55283 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH4P55283 AL603764.1-201ENST00000636452 321 ntBASIC15.67■□□□□ 0.1
CDH4P55283 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 AC073347.1-201ENST00000421633 2643 ntBASIC15.67■□□□□ 0.1
CDH4P55283 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CDH4P55283 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
CDH4P55283 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH4P55283 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH4P55283 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH4P55283 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDH4P55283 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms