Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.72■□□□□ 0.59
NUP98P52948 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.72■□□□□ 0.59
NUP98P52948 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.72■□□□□ 0.59
NUP98P52948 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.72■□□□□ 0.59
NUP98P52948 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.72■□□□□ 0.59
NUP98P52948 ZBED1P1-201ENST00000502364 1930 ntBASIC18.72■□□□□ 0.59
NUP98P52948 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.72■□□□□ 0.59
NUP98P52948 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.72■□□□□ 0.59
NUP98P52948 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.72■□□□□ 0.59
NUP98P52948 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.72■□□□□ 0.59
NUP98P52948 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.72■□□□□ 0.59
NUP98P52948 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.72■□□□□ 0.59
NUP98P52948 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.72■□□□□ 0.59
NUP98P52948 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.72■□□□□ 0.59
NUP98P52948 BX088702.1-201ENST00000610784 235 ntBASIC18.72■□□□□ 0.59
NUP98P52948 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP98P52948 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP98P52948 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 AC018629.1-201ENST00000623381 1736 ntBASIC18.71■□□□□ 0.59
NUP98P52948 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP98P52948 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP98P52948 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.71■□□□□ 0.59
NUP98P52948 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.71■□□□□ 0.59
NUP98P52948 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.71■□□□□ 0.59
NUP98P52948 Z97180.1-201ENST00000445173 988 ntBASIC18.71■□□□□ 0.59
NUP98P52948 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.71■□□□□ 0.59
NUP98P52948 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.71■□□□□ 0.59
NUP98P52948 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NUP98P52948 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP98P52948 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP98P52948 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP98P52948 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP98P52948 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP98P52948 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NUP98P52948 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 SALL4P5-201ENST00000419001 1760 ntBASIC18.7■□□□□ 0.58
NUP98P52948 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NUP98P52948 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.7■□□□□ 0.58
NUP98P52948 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NUP98P52948 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.7■□□□□ 0.58
NUP98P52948 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 AC131206.1-201ENST00000538078 1211 ntBASIC18.7■□□□□ 0.58
NUP98P52948 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.7■□□□□ 0.58
NUP98P52948 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 AC013726.1-201ENST00000563747 2285 ntBASIC18.7■□□□□ 0.58
NUP98P52948 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP98P52948 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.7■□□□□ 0.58
NUP98P52948 ISCA2P1-201ENST00000425548 448 ntBASIC18.7■□□□□ 0.58
NUP98P52948 MAGEA5-201ENST00000446757 942 ntBASIC18.7■□□□□ 0.58
NUP98P52948 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NUP98P52948 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NUP98P52948 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.69■□□□□ 0.58
NUP98P52948 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NUP98P52948 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 AC078875.1-201ENST00000431907 724 ntBASIC18.69■□□□□ 0.58
NUP98P52948 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
NUP98P52948 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
NUP98P52948 IGLV3-15-201ENST00000518356 244 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms