Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RNF144AP50876 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RNF144AP50876 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF144AP50876 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RNF144AP50876 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF144AP50876 AC241585.1-201ENST00000433527 519 ntBASIC14.4□□□□□ -0.1
RNF144AP50876 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF144AP50876 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF144AP50876 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RNF144AP50876 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.4□□□□□ -0.1
RNF144AP50876 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.4□□□□□ -0.1
RNF144AP50876 AC009407.1-201ENST00000568958 598 ntBASIC14.4□□□□□ -0.1
RNF144AP50876 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RNF144AP50876 AC027796.2-201ENST00000575326 344 ntBASIC14.4□□□□□ -0.1
RNF144AP50876 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF144AP50876 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF144AP50876 AC004790.1-201ENST00000612686 536 ntBASIC14.4□□□□□ -0.1
RNF144AP50876 AC004461.2-201ENST00000629517 803 ntBASIC14.4□□□□□ -0.1
RNF144AP50876 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RNF144AP50876 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RNF144AP50876 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF144AP50876 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF144AP50876 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF144AP50876 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 AC087499.5-201ENST00000452760 1342 ntBASIC14.4□□□□□ -0.1
RNF144AP50876 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RNF144AP50876 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.11
RNF144AP50876 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF144AP50876 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RNF144AP50876 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF144AP50876 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF144AP50876 FAM8A3P-201ENST00000427218 844 ntBASIC14.39□□□□□ -0.11
RNF144AP50876 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.39□□□□□ -0.11
RNF144AP50876 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.39□□□□□ -0.11
RNF144AP50876 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF144AP50876 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF144AP50876 AC004840.1-201ENST00000636359 365 ntBASIC14.39□□□□□ -0.11
RNF144AP50876 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 Z97205.2-201ENST00000564697 1639 ntBASIC14.39□□□□□ -0.11
RNF144AP50876 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 LINC01101-201ENST00000622953 1884 ntBASIC14.39□□□□□ -0.11
RNF144AP50876 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF144AP50876 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF144AP50876 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms