Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
APOBEC1P41238 AC120045.2-201ENST00000567334 178 ntBASIC13.93□□□□□ -0.18
APOBEC1P41238 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.93□□□□□ -0.18
APOBEC1P41238 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.93□□□□□ -0.18
APOBEC1P41238 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.93□□□□□ -0.18
APOBEC1P41238 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.93□□□□□ -0.18
APOBEC1P41238 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.93□□□□□ -0.18
APOBEC1P41238 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.93□□□□□ -0.18
APOBEC1P41238 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
APOBEC1P41238 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
APOBEC1P41238 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.93□□□□□ -0.18
APOBEC1P41238 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOBEC1P41238 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APOBEC1P41238 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBEC1P41238 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
APOBEC1P41238 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.92□□□□□ -0.18
APOBEC1P41238 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 SOCS2P1-201ENST00000417727 557 ntBASIC13.92□□□□□ -0.18
APOBEC1P41238 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBEC1P41238 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.92□□□□□ -0.18
APOBEC1P41238 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBEC1P41238 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
APOBEC1P41238 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBEC1P41238 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBEC1P41238 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.92□□□□□ -0.18
APOBEC1P41238 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBEC1P41238 AC140912.1-201ENST00000577171 1054 ntBASIC13.92□□□□□ -0.18
APOBEC1P41238 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBEC1P41238 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.92□□□□□ -0.18
APOBEC1P41238 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 CHCHD2P3-201ENST00000603038 451 ntBASIC13.92□□□□□ -0.18
APOBEC1P41238 AC133539.2-201ENST00000604757 467 ntBASIC13.92□□□□□ -0.18
APOBEC1P41238 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBEC1P41238 AC007431.3-201ENST00000623221 587 ntBASIC13.92□□□□□ -0.18
APOBEC1P41238 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.92□□□□□ -0.18
APOBEC1P41238 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
APOBEC1P41238 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 DBET-201ENST00000630918 3363 ntBASIC13.92□□□□□ -0.18
APOBEC1P41238 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.92□□□□□ -0.18
APOBEC1P41238 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBEC1P41238 ZBED1P1-201ENST00000502364 1930 ntBASIC13.92□□□□□ -0.18
APOBEC1P41238 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APOBEC1P41238 AC007787.1-201ENST00000588095 1583 ntBASIC13.92□□□□□ -0.18
APOBEC1P41238 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
APOBEC1P41238 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.91□□□□□ -0.18
APOBEC1P41238 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 AC144831.1-201ENST00000573312 2656 ntBASIC13.91□□□□□ -0.18
APOBEC1P41238 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
APOBEC1P41238 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.91□□□□□ -0.18
APOBEC1P41238 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.91□□□□□ -0.18
APOBEC1P41238 C1QBPP1-201ENST00000400117 770 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms