Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFC3P40938 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFC3P40938 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFC3P40938 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFC3P40938 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFC3P40938 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RFC3P40938 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 DRD5P1-201ENST00000456605 1438 ntBASIC14.15□□□□□ -0.14
RFC3P40938 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.15□□□□□ -0.14
RFC3P40938 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RFC3P40938 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.15□□□□□ -0.14
RFC3P40938 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 AL355864.2-201ENST00000447420 863 ntBASIC14.15□□□□□ -0.14
RFC3P40938 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.15□□□□□ -0.14
RFC3P40938 BNIP3P42-201ENST00000454982 569 ntBASIC14.15□□□□□ -0.14
RFC3P40938 AC093433.1-201ENST00000458048 571 ntBASIC14.15□□□□□ -0.14
RFC3P40938 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RFC3P40938 AP001889.1-201ENST00000525414 633 ntBASIC14.15□□□□□ -0.14
RFC3P40938 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 AC015910.1-201ENST00000579400 975 ntBASIC14.15□□□□□ -0.14
RFC3P40938 BNIP3P29-201ENST00000598302 571 ntBASIC14.15□□□□□ -0.14
RFC3P40938 AC011447.5-201ENST00000616168 564 ntBASIC14.15□□□□□ -0.14
RFC3P40938 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.15□□□□□ -0.14
RFC3P40938 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 CICP4-201ENST00000447359 2812 ntBASIC14.15□□□□□ -0.14
RFC3P40938 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.15□□□□□ -0.14
RFC3P40938 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFC3P40938 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RFC3P40938 AC134312.5-201ENST00000568031 1313 ntBASIC14.15□□□□□ -0.15
RFC3P40938 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 AL009178.2-201ENST00000597278 2719 ntBASIC14.14□□□□□ -0.15
RFC3P40938 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
RFC3P40938 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 AC007326.2-201ENST00000624224 7579 ntBASIC14.14□□□□□ -0.15
RFC3P40938 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RFC3P40938 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.14□□□□□ -0.15
RFC3P40938 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.14□□□□□ -0.15
RFC3P40938 AL133267.1-201ENST00000398220 340 ntBASIC14.14□□□□□ -0.15
RFC3P40938 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RFC3P40938 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.14□□□□□ -0.15
RFC3P40938 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.14□□□□□ -0.15
RFC3P40938 AC106760.1-201ENST00000508690 800 ntBASIC14.14□□□□□ -0.15
RFC3P40938 AC026410.3-201ENST00000514280 936 ntBASIC14.14□□□□□ -0.15
RFC3P40938 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.14□□□□□ -0.15
RFC3P40938 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.14□□□□□ -0.15
RFC3P40938 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.14□□□□□ -0.15
RFC3P40938 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.14□□□□□ -0.15
RFC3P40938 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms