Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPA3P35244 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.63■□□□□ 0.09
RPA3P35244 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RPA3P35244 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.62■□□□□ 0.09
RPA3P35244 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.62■□□□□ 0.09
RPA3P35244 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.62■□□□□ 0.09
RPA3P35244 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.62■□□□□ 0.09
RPA3P35244 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.62■□□□□ 0.09
RPA3P35244 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RPA3P35244 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.62■□□□□ 0.09
RPA3P35244 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 AC069262.1-201ENST00000539058 672 ntBASIC15.62■□□□□ 0.09
RPA3P35244 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.62■□□□□ 0.09
RPA3P35244 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.62■□□□□ 0.09
RPA3P35244 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.62■□□□□ 0.09
RPA3P35244 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.62■□□□□ 0.09
RPA3P35244 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.62■□□□□ 0.09
RPA3P35244 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 AC093028.1-201ENST00000622998 982 ntBASIC15.62■□□□□ 0.09
RPA3P35244 Z92544.3-201ENST00000624747 417 ntBASIC15.62■□□□□ 0.09
RPA3P35244 REXO1L2P-201ENST00000425429 2069 ntBASIC15.62■□□□□ 0.09
RPA3P35244 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RPA3P35244 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.62■□□□□ 0.09
RPA3P35244 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.62■□□□□ 0.09
RPA3P35244 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 AL607033.1-201ENST00000623900 1599 ntBASIC15.62■□□□□ 0.09
RPA3P35244 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPA3P35244 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.61■□□□□ 0.09
RPA3P35244 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 AL139010.1-201ENST00000454878 894 ntBASIC15.61■□□□□ 0.09
RPA3P35244 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.61■□□□□ 0.09
RPA3P35244 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 AC007967.4-201ENST00000614700 386 ntBASIC15.61■□□□□ 0.09
RPA3P35244 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.61■□□□□ 0.09
RPA3P35244 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.61■□□□□ 0.09
RPA3P35244 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPA3P35244 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms