Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40P25942 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40P25942 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.25□□□□□ -0.29
CD40P25942 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 AC132938.4-201ENST00000623835 848 ntBASIC13.25□□□□□ -0.29
CD40P25942 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 CNN2P8-201ENST00000421872 913 ntBASIC13.24□□□□□ -0.29
CD40P25942 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.24□□□□□ -0.29
CD40P25942 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.24□□□□□ -0.29
CD40P25942 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.24□□□□□ -0.29
CD40P25942 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.24□□□□□ -0.29
CD40P25942 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.24□□□□□ -0.29
CD40P25942 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.24□□□□□ -0.29
CD40P25942 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.24□□□□□ -0.29
CD40P25942 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD40P25942 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CD40P25942 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 KRT8P14-201ENST00000414254 1442 ntBASIC13.23□□□□□ -0.29
CD40P25942 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms