Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATP2B1P20020 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.82■□□□□ 0.44
ATP2B1P20020 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2B1P20020 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2B1P20020 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.82■□□□□ 0.44
ATP2B1P20020 UGT1A2P-201ENST00000454886 866 ntBASIC17.82■□□□□ 0.44
ATP2B1P20020 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2B1P20020 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2B1P20020 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.82■□□□□ 0.44
ATP2B1P20020 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2B1P20020 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2B1P20020 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2B1P20020 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2B1P20020 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2B1P20020 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 AL121723.1-201ENST00000445194 1519 ntBASIC17.82■□□□□ 0.44
ATP2B1P20020 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2B1P20020 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2B1P20020 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 KRT8P44-201ENST00000441609 1350 ntBASIC17.81■□□□□ 0.44
ATP2B1P20020 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2B1P20020 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
ATP2B1P20020 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
ATP2B1P20020 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ATP2B1P20020 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ATP2B1P20020 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.81■□□□□ 0.44
ATP2B1P20020 INGX-202ENST00000489074 768 ntBASIC17.81■□□□□ 0.44
ATP2B1P20020 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.81■□□□□ 0.44
ATP2B1P20020 AC104794.3-201ENST00000566840 1248 ntBASIC17.81■□□□□ 0.44
ATP2B1P20020 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.81■□□□□ 0.44
ATP2B1P20020 AC011467.4-201ENST00000594891 528 ntBASIC17.81■□□□□ 0.44
ATP2B1P20020 AC007686.3-201ENST00000619017 3487 ntBASIC17.81■□□□□ 0.44
ATP2B1P20020 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ATP2B1P20020 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2B1P20020 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP2B1P20020 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATP2B1P20020 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP2B1P20020 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.8■□□□□ 0.44
ATP2B1P20020 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2B1P20020 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ATP2B1P20020 GNAQP1-201ENST00000444815 1067 ntBASIC17.8■□□□□ 0.44
ATP2B1P20020 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.8■□□□□ 0.44
ATP2B1P20020 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2B1P20020 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 ZNF890P-202ENST00000530367 1156 ntBASIC17.8■□□□□ 0.44
ATP2B1P20020 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2B1P20020 AC015910.1-201ENST00000579400 975 ntBASIC17.8■□□□□ 0.44
ATP2B1P20020 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.8■□□□□ 0.44
ATP2B1P20020 AC004790.1-201ENST00000612686 536 ntBASIC17.8■□□□□ 0.44
ATP2B1P20020 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.8■□□□□ 0.44
ATP2B1P20020 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP2B1P20020 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2B1P20020 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2B1P20020 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ATP2B1P20020 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2B1P20020 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms