Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC25.53■■□□□ 1.68
CFTRP13569 Z69890.1-201ENST00000382990 339 ntBASIC25.53■■□□□ 1.68
CFTRP13569 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC25.53■■□□□ 1.68
CFTRP13569 GUSBP10-201ENST00000417412 665 ntBASIC25.53■■□□□ 1.68
CFTRP13569 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC25.53■■□□□ 1.68
CFTRP13569 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC25.53■■□□□ 1.68
CFTRP13569 CR383656.3-201ENST00000551315 183 ntBASIC25.53■■□□□ 1.68
CFTRP13569 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC25.53■■□□□ 1.68
CFTRP13569 MIR3180-2-201ENST00000581748 88 ntBASIC25.53■■□□□ 1.68
CFTRP13569 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC25.53■■□□□ 1.68
CFTRP13569 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
CFTRP13569 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
CFTRP13569 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 MARK2P16-201ENST00000605714 1723 ntBASIC25.53■■□□□ 1.68
CFTRP13569 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC25.53■■□□□ 1.68
CFTRP13569 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CFTRP13569 LILRP1-201ENST00000444199 1370 ntBASIC25.53■■□□□ 1.68
CFTRP13569 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC25.53■■□□□ 1.68
CFTRP13569 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC25.53■■□□□ 1.68
CFTRP13569 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
CFTRP13569 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC25.53■■□□□ 1.68
CFTRP13569 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC25.53■■□□□ 1.68
CFTRP13569 AC007952.4-201ENST00000573866 637 ntBASIC25.53■■□□□ 1.68
CFTRP13569 RN7SL470P-201ENST00000583069 259 ntBASIC25.53■■□□□ 1.68
CFTRP13569 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFTRP13569 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
CFTRP13569 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFTRP13569 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC25.52■■□□□ 1.68
CFTRP13569 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFTRP13569 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFTRP13569 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFTRP13569 FAS-202ENST00000352159 1722 ntTSL 5 BASIC25.52■■□□□ 1.68
CFTRP13569 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFTRP13569 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC25.52■■□□□ 1.68
CFTRP13569 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CFTRP13569 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC25.52■■□□□ 1.68
CFTRP13569 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC25.52■■□□□ 1.68
CFTRP13569 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC25.52■■□□□ 1.68
CFTRP13569 EIF5AP2-201ENST00000585668 1047 ntBASIC25.52■■□□□ 1.68
CFTRP13569 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC25.52■■□□□ 1.68
CFTRP13569 DBP-202ENST00000593500 712 ntTSL 2 BASIC25.52■■□□□ 1.68
CFTRP13569 AC073592.2-201ENST00000623062 780 ntBASIC25.52■■□□□ 1.68
CFTRP13569 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFTRP13569 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFTRP13569 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
CFTRP13569 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC25.51■■□□□ 1.67
CFTRP13569 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
CFTRP13569 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 AC105250.1-201ENST00000509378 2057 ntBASIC25.51■■□□□ 1.67
CFTRP13569 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CFTRP13569 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 USP4-203ENST00000415188 1454 ntTSL 3 BASIC25.51■■□□□ 1.67
CFTRP13569 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CFTRP13569 AC007292.2-201ENST00000593524 1812 ntBASIC25.51■■□□□ 1.67
CFTRP13569 STK16-203ENST00000409516 895 ntTSL 2 BASIC25.51■■□□□ 1.67
CFTRP13569 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
CFTRP13569 AC024293.1-201ENST00000467930 498 ntBASIC25.51■■□□□ 1.67
CFTRP13569 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC25.51■■□□□ 1.67
CFTRP13569 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC25.51■■□□□ 1.67
CFTRP13569 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC25.51■■□□□ 1.67
CFTRP13569 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC25.51■■□□□ 1.67
CFTRP13569 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CFTRP13569 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC25.5■■□□□ 1.67
CFTRP13569 SUPT20HL2-201ENST00000486479 2409 ntBASIC25.5■■□□□ 1.67
CFTRP13569 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC25.5■■□□□ 1.67
CFTRP13569 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC25.5■■□□□ 1.67
CFTRP13569 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC25.5■■□□□ 1.67
CFTRP13569 AC012158.2-201ENST00000536546 354 ntBASIC25.5■■□□□ 1.67
CFTRP13569 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC25.5■■□□□ 1.67
CFTRP13569 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
CFTRP13569 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFTRP13569 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
CFTRP13569 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms