Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HOXC6P09630 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HOXC6P09630 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HOXC6P09630 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HOXC6P09630 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HOXC6P09630 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HOXC6P09630 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC6P09630 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HOXC6P09630 AC127383.1-201ENST00000444697 1800 ntBASIC17.2■□□□□ 0.34
HOXC6P09630 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 ACTG1P2-201ENST00000415776 1125 ntBASIC17.2■□□□□ 0.34
HOXC6P09630 ACTG1P11-201ENST00000425411 1125 ntBASIC17.2■□□□□ 0.34
HOXC6P09630 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC6P09630 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC6P09630 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.2■□□□□ 0.34
HOXC6P09630 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.2■□□□□ 0.34
HOXC6P09630 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.2■□□□□ 0.34
HOXC6P09630 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.2■□□□□ 0.34
HOXC6P09630 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 AC068587.8-201ENST00000641239 219 ntBASIC17.2■□□□□ 0.34
HOXC6P09630 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HOXC6P09630 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HOXC6P09630 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HOXC6P09630 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC6P09630 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC6P09630 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC6P09630 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.19■□□□□ 0.34
HOXC6P09630 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC6P09630 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 AL365203.3-201ENST00000609742 2057 ntBASIC17.19■□□□□ 0.34
HOXC6P09630 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC6P09630 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HOXC6P09630 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC6P09630 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC6P09630 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC6P09630 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC6P09630 AC007274.2-201ENST00000421675 662 ntBASIC17.19■□□□□ 0.34
HOXC6P09630 RNMTL1P1-201ENST00000454103 560 ntBASIC17.19■□□□□ 0.34
HOXC6P09630 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.19■□□□□ 0.34
HOXC6P09630 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC6P09630 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.19■□□□□ 0.34
HOXC6P09630 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC6P09630 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
HOXC6P09630 PRKXP1-201ENST00000561423 1122 ntBASIC17.19■□□□□ 0.34
HOXC6P09630 MIR4783-201ENST00000580343 82 ntBASIC17.19■□□□□ 0.34
HOXC6P09630 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 AL133499.1-201ENST00000596207 608 ntBASIC17.19■□□□□ 0.34
HOXC6P09630 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.19■□□□□ 0.34
HOXC6P09630 AF254983.2-201ENST00000612331 135 ntBASIC17.19■□□□□ 0.34
HOXC6P09630 AL805961.1-203ENST00000641078 1258 ntBASIC17.19■□□□□ 0.34
HOXC6P09630 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC6P09630 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC6P09630 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC6P09630 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HOXC6P09630 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 AC004899.1-201ENST00000424687 1714 ntBASIC17.18■□□□□ 0.34
HOXC6P09630 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms