Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
THBS1P07996 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.21□□□□□ -0.13
THBS1P07996 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.21□□□□□ -0.13
THBS1P07996 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS1P07996 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS1P07996 TSSK5P-201ENST00000423978 907 ntBASIC14.21□□□□□ -0.13
THBS1P07996 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.21□□□□□ -0.13
THBS1P07996 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.21□□□□□ -0.13
THBS1P07996 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.21□□□□□ -0.13
THBS1P07996 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS1P07996 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.21□□□□□ -0.13
THBS1P07996 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
THBS1P07996 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.21□□□□□ -0.13
THBS1P07996 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS1P07996 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.21□□□□□ -0.13
THBS1P07996 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS1P07996 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
THBS1P07996 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.21□□□□□ -0.13
THBS1P07996 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS1P07996 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
THBS1P07996 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS1P07996 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS1P07996 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS1P07996 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS1P07996 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 PCDHA3-202ENST00000532566 4594 ntBASIC14.2□□□□□ -0.14
THBS1P07996 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 MIR661-201ENST00000384842 89 ntBASIC14.2□□□□□ -0.14
THBS1P07996 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.2□□□□□ -0.14
THBS1P07996 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.2□□□□□ -0.14
THBS1P07996 BASP1P1-201ENST00000430708 665 ntBASIC14.2□□□□□ -0.14
THBS1P07996 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.2□□□□□ -0.14
THBS1P07996 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.2□□□□□ -0.14
THBS1P07996 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 MEIS3P1-201ENST00000495167 958 ntBASIC14.2□□□□□ -0.14
THBS1P07996 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.2□□□□□ -0.14
THBS1P07996 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.2□□□□□ -0.14
THBS1P07996 AC093214.1-201ENST00000511688 1107 ntBASIC14.2□□□□□ -0.14
THBS1P07996 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.2□□□□□ -0.14
THBS1P07996 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.2□□□□□ -0.14
THBS1P07996 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.2□□□□□ -0.14
THBS1P07996 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 AL158212.4-201ENST00000624062 1286 ntBASIC14.2□□□□□ -0.14
THBS1P07996 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS1P07996 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
THBS1P07996 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms