Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR3DP05423 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.4■□□□□ 0.54
POLR3DP05423 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
POLR3DP05423 AC092933.1-201ENST00000393644 945 ntBASIC18.4■□□□□ 0.54
POLR3DP05423 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR3DP05423 KLF2P4-201ENST00000451959 1225 ntBASIC18.4■□□□□ 0.54
POLR3DP05423 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR3DP05423 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.4■□□□□ 0.54
POLR3DP05423 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.4■□□□□ 0.54
POLR3DP05423 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 AC009090.5-201ENST00000624886 2285 ntBASIC18.4■□□□□ 0.54
POLR3DP05423 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR3DP05423 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.4■□□□□ 0.54
POLR3DP05423 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR3DP05423 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR3DP05423 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.39■□□□□ 0.54
POLR3DP05423 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR3DP05423 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.39■□□□□ 0.54
POLR3DP05423 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR3DP05423 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR3DP05423 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
POLR3DP05423 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR3DP05423 AC007551.1-201ENST00000457394 519 ntBASIC18.39■□□□□ 0.53
POLR3DP05423 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR3DP05423 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 FTH1P14-201ENST00000482930 551 ntBASIC18.39■□□□□ 0.53
POLR3DP05423 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.39■□□□□ 0.53
POLR3DP05423 AC022137.2-201ENST00000503482 481 ntBASIC18.39■□□□□ 0.53
POLR3DP05423 AC106760.1-201ENST00000508690 800 ntBASIC18.39■□□□□ 0.53
POLR3DP05423 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.39■□□□□ 0.53
POLR3DP05423 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.39■□□□□ 0.53
POLR3DP05423 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.39■□□□□ 0.53
POLR3DP05423 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.39■□□□□ 0.53
POLR3DP05423 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR3DP05423 BX539320.1-201ENST00000623759 877 ntBASIC18.39■□□□□ 0.53
POLR3DP05423 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR3DP05423 AC022532.1-201ENST00000624563 1728 ntBASIC18.39■□□□□ 0.53
POLR3DP05423 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR3DP05423 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR3DP05423 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
POLR3DP05423 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR3DP05423 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR3DP05423 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR3DP05423 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
POLR3DP05423 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR3DP05423 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
POLR3DP05423 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR3DP05423 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
POLR3DP05423 AC084364.1-201ENST00000551967 1556 ntBASIC18.38■□□□□ 0.53
POLR3DP05423 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR3DP05423 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
POLR3DP05423 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR3DP05423 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR3DP05423 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR3DP05423 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
POLR3DP05423 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR3DP05423 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR3DP05423 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR3DP05423 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR3DP05423 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.38■□□□□ 0.53
POLR3DP05423 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR3DP05423 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.38■□□□□ 0.53
POLR3DP05423 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms