Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.97□□□□□ -0.01
TNFP01375 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.97□□□□□ -0.01
TNFP01375 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.97□□□□□ -0.01
TNFP01375 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.97□□□□□ -0.01
TNFP01375 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.97□□□□□ -0.01
TNFP01375 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 AC091271.1-201ENST00000611877 1162 ntBASIC14.97□□□□□ -0.01
TNFP01375 MIR6869-201ENST00000619434 62 ntBASIC14.97□□□□□ -0.01
TNFP01375 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.97□□□□□ -0.01
TNFP01375 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
TNFP01375 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFP01375 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TNFP01375 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TNFP01375 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TNFP01375 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TNFP01375 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFP01375 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.96□□□□□ -0.01
TNFP01375 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFP01375 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.96□□□□□ -0.01
TNFP01375 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.96□□□□□ -0.01
TNFP01375 AC104457.1-201ENST00000401024 814 ntBASIC14.96□□□□□ -0.01
TNFP01375 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TNFP01375 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.96□□□□□ -0.01
TNFP01375 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFP01375 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TNFP01375 AC245100.3-201ENST00000441281 285 ntBASIC14.96□□□□□ -0.01
TNFP01375 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.96□□□□□ -0.01
TNFP01375 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.96□□□□□ -0.01
TNFP01375 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.96□□□□□ -0.01
TNFP01375 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.96□□□□□ -0.01
TNFP01375 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFP01375 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TNFP01375 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.96□□□□□ -0.01
TNFP01375 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFP01375 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TNFP01375 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
TNFP01375 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFP01375 AC092850.2-201ENST00000623821 2697 ntBASIC14.96□□□□□ -0.02
TNFP01375 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TNFP01375 AC090616.6-203ENST00000579186 1945 ntBASIC14.96□□□□□ -0.02
TNFP01375 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.96□□□□□ -0.02
TNFP01375 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.96□□□□□ -0.02
TNFP01375 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
TNFP01375 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.95□□□□□ -0.02
TNFP01375 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.95□□□□□ -0.02
TNFP01375 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TNFP01375 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TNFP01375 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFP01375 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFP01375 EIF3FP3-201ENST00000434851 1086 ntBASIC14.95□□□□□ -0.02
TNFP01375 FAM8A4P-201ENST00000435433 1213 ntBASIC14.95□□□□□ -0.02
TNFP01375 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFP01375 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFP01375 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFP01375 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFP01375 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.95□□□□□ -0.02
TNFP01375 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFP01375 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.95□□□□□ -0.02
TNFP01375 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TNFP01375 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.95□□□□□ -0.02
TNFP01375 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFP01375 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFP01375 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.95□□□□□ -0.02
TNFP01375 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFP01375 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms